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CANDC
2006
ACM
14 years 9 months ago
Prediction of protein subcellular location using hydrophobic patterns of amino acid sequence
The function of eukaryotic protein is closely correlated with its subcellular location. The number of newly found protein sequences entering into data banks is rapidly increasing ...
Tongliang Zhang, Yongsheng Ding, Kuo-Chen Chou
CANDC
2006
ACM
14 years 9 months ago
Hydrophobic collapse in (in silico) protein folding
A model of hydrophobic collapse, which is treated as the driving force for protein folding, is presented. This model is the superposition of three models commonly used in protein ...
Michal Brylinski, Leszek Konieczny, Irena Roterman
CANDC
2006
ACM
14 years 9 months ago
A comment on "Prediction of protein structural classes by a new measure of information discrepancy"
Protein structural class describes the overall folding type of a protein or its domain. A number of methods were developed to predict protein structural class based on its primary...
Kanaka Durga Kedarisetti, Lukasz A. Kurgan, Scott ...
CANDC
2006
ACM
14 years 9 months ago
An RNA folding algorithm including pseudoknots based on dynamic weighted matching
On the basis of maximum weighted matching (MWM) algorithm, we introduced a dynamic weight related with stem length and used a recursive algorithm to predict RNA secondary structur...
Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang
CANDC
2006
ACM
14 years 9 months ago
Dealing with repetitions in sequencing by hybridization
DNA sequencing by hybridization (SBH) induces errors in the biochemical experiment. Some of them are random and disappear when the experiment is repeated. Others are systematic, i...
Jacek Blazewicz, Fred Glover, Marta Kasprzak, Wojc...
Emerging Technology
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